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<big>'''This is the new home for the BrainMapping.org Wiki'''</big>
__NOTOC__
== Center for Cognitive Neuroscience at UCLA ==


== Information for New Users ==
Welcome to the Wiki of the Center for Cognitive Neuroscience at UCLA (CCN at UCLA).  Please find and contribute helpful information for lab usage here.
* [[Computer Resources]]
* [[Tools & Utility]]
* [[Hoffman2:UNIX_Tutorial | Command Line / Unix]]
* [[FAQ]]


== Reformatting Information ==
Main CCN Website: [https://www.staglincenterforcogneuro.semel.ucla.edu/ Staglin Center for Cognitive Neuroscience]
* [[Hoffman2]]
* [[MR]]
* [[EEG]]


== Computing ==
=== Help Contacts ===
* [[HowTo Pages]]
Please review this wiki before contacting CCN staff. The [[Staglin MR Suite]] page and [[Main Page#Troubleshooting|Troubleshooting]] section on this page contain the answers to many frequently-asked questions and issues!
* [[Every Day UNIX and Working with Hoffman]]
* ccn-safety@mednet.ucla.edu: Email this address with questions about metal and safety clearance.
* [[Bash Scripting Class]]
* ccnsupport@g.ucla.edu: Email this address with all other CCN-related questions and requests.
* [[ Python ]]


== EEG/FMRI ==
=== Staglin Center ===
* [[EEG]] (includes EEG-fMRI)
 
== Staglin Center ==
* [[Staglin EEG Suite]]
* [[Staglin EEG Suite]]
** Includes general information about the EEG suite, nets, and equipment
* [[Staglin MR Suite]]
* [[Staglin MR Suite]]
** Includes general policies, project setup (e.g., adding a new user, DICOM accounts), facilities and equipment in the suite, safety certification, personnel contact information, and common questions about administrative procedures
*Staglin Ultrasound Suite


== Classes ==
=== Classes ===
* [[Principles of Neuroimaging - 2010-2011]]
* [[CCN Workshops]]
* [[Principles of Neuroimaging - 2011-2012]]
* [[Principles of Neuroimaging - 2012-2013]]
* [http://www.ccn.ucla.edu/bmcweb/bmc_bios/SusanBookheimer/Psych292.php Psych 292: Functional Neuroanatomy for the Neuropsychologist - 2010]
* [[fMRI Journal Club: Ethical issues in neuroimaging]]
* [[Scripting Basics: Python]]
* [[FSL Group]]
* [[Neuroimaging+ Journal Club]]
* [[Neuroimaging+ Journal Club]]
----
* [[Principles of Neuroimaging - 2016-2017]]
* [[Principles of Neuroimaging A (2009)]]
* [[Principles of Neuroimaging - 2015-2016]]
* [[Principles of Neuroimaging B - 2010]]
 
** [[Principles of Neuroimaging B / functional MRI (2009)]]
=== Computing ===
* [[Hoffman2 maintenance and Issues]]
* [[Hoffman2]]
* [[Dicom]]
* [[Psychophysics]]
* [[Licensing]]
* DICOM Viewers:
** [https://horosproject.org/download-horos/ Horos]: An open-source version of OsiriX.
** [https://www.nitrc.org/projects/mricron mricron]: A lightweight NIfTI image viewer with some useful additional tools (e.g., volume renderings, dcm2nii support).
<!-- * [[FUNC]] -->
 
=== EEG/fMRI ===
* [[EEG]] (includes EEG-fMRI)
* [[MR]] (data collection and processing)
<!-- * [[fNIRS]] -->
 
=== Resources ===
* [[New User Checklist]]
* [[Software Licenses]]
 
*[[Incidental Finding Report Tool |Incidental Finding Report Tool]]
<!-- * [[Resources at UCLA]] -->


==General Information==
=== Troubleshooting ===
* [[Setting Up and Using Git]] (quicky tutorial)
* [[Common Issues]]
* [http://redmine.ccn.ucla.edu/ CCN Project Management (redmine)]
** Includes problems with the console, peripherals setup, and scanning failures.
* [[Setup Subjects and ProjectManager]] (old tool?)
* [[Eye Tracking#Troubleshooting|Eyetracking]]
* [http://www.redmine.org/guide#User-guide/ Redmine User Guide]
* [[Opto_Acoustic_Noise_Canceling_Headphones#Troubleshooting|Opto Acoustic Headphones]]
* [[Current Events]]
* [[BOLDscreen_Display#Troubleshooting|BOLD Screen]]
* [[Files of Interest (logos, etc.)]]
* [[Current_Designs_Response_Devices#Troubleshooting|Response Devices]]
* [[Alzheimer's Disease papers]]
* [[MR-Safe Glasses#Troubleshooting|MR-Safe Glasses]]
** Miles Decommissioned, Moving to Hoffman


== Hardware ==
===Instructions For Admins ===
* [[A Simple Serial Based TTL Device]]
* [[Instructions]]
* [[Testing]]

Latest revision as of 22:17, 13 May 2025

Center for Cognitive Neuroscience at UCLA

Welcome to the Wiki of the Center for Cognitive Neuroscience at UCLA (CCN at UCLA). Please find and contribute helpful information for lab usage here.

Main CCN Website: Staglin Center for Cognitive Neuroscience

Help Contacts

Please review this wiki before contacting CCN staff. The Staglin MR Suite page and Troubleshooting section on this page contain the answers to many frequently-asked questions and issues!

  • ccn-safety@mednet.ucla.edu: Email this address with questions about metal and safety clearance.
  • ccnsupport@g.ucla.edu: Email this address with all other CCN-related questions and requests.

Staglin Center

  • Staglin EEG Suite
    • Includes general information about the EEG suite, nets, and equipment
  • Staglin MR Suite
    • Includes general policies, project setup (e.g., adding a new user, DICOM accounts), facilities and equipment in the suite, safety certification, personnel contact information, and common questions about administrative procedures
  • Staglin Ultrasound Suite

Classes

Computing

EEG/fMRI

  • EEG (includes EEG-fMRI)
  • MR (data collection and processing)

Resources

Troubleshooting

Instructions For Admins