User contributions for Jonathan

3 December 2024

• 17:4717:47, 3 December 2024 diff hist +19‎ Licensing ‎No edit summary current
• 17:4317:43, 3 December 2024 diff hist 0‎ N Licensing ‎ Created blank page
• 17:4317:43, 3 December 2024 diff hist +16‎ Main Page ‎ →‎Computing

13 December 2023

• 17:1817:18, 13 December 2023 diff hist −14‎ Hoffman2:Software Tools:dmriprep ‎ →‎dmriprep current
• 17:1517:15, 13 December 2023 diff hist −5‎ Hoffman2:Software Tools:dmriprep ‎ →‎dmriprep
• 17:1517:15, 13 December 2023 diff hist +260‎ Hoffman2:Software Tools:dmriprep ‎ →‎dmriprep
• 17:0217:02, 13 December 2023 diff hist +9‎ Hoffman2:Software Tools:dmriprep ‎ →‎dmriprep
• 17:0217:02, 13 December 2023 diff hist +352‎ N Hoffman2:Software Tools:dmriprep ‎ Created page with "===dmriprep=== module load apptainer singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif data/bids_root/ out/ participant -w work/ Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage"
• 16:5916:59, 13 December 2023 diff hist +308‎ Hoffman2:Software Tools ‎No edit summary
• 16:2116:21, 13 December 2023 diff hist −3‎ Hoffman2:Software Tools:DSI Studio ‎ →‎DSI Studio current
• 16:2116:21, 13 December 2023 diff hist +22‎ Hoffman2:Software Tools:DSI Studio ‎ →‎DSI Studio
• 16:2016:20, 13 December 2023 diff hist +182‎ Hoffman2:Software Tools:DSI Studio ‎ →‎DSI Studio
• 15:5015:50, 13 December 2023 diff hist +2‎ Hoffman2:Software Tools:DSI Studio ‎ →‎DSI Studio
• 15:4915:49, 13 December 2023 diff hist +18‎ Hoffman2:Software Tools:DSI Studio ‎No edit summary
• 15:4915:49, 13 December 2023 diff hist +98‎ N Hoffman2:Software Tools:DSI Studio ‎ Created page with "Log in via NoMachine module load singularity singularity exec dsistudio_2023.07.08.sif dsi_studio"
• 15:4815:48, 13 December 2023 diff hist +46‎ Hoffman2:Software Tools ‎ →‎DSI Studio

12 December 2023

• 00:1000:10, 12 December 2023 diff hist −1‎ Hoffman2:Software Tools ‎ →‎DSI Studio
• 00:1000:10, 12 December 2023 diff hist +330‎ Hoffman2:Software Tools ‎No edit summary
• 00:0100:01, 12 December 2023 diff hist −24‎ Hoffman2:Software Tools:HCPBench ‎No edit summary current

11 December 2023

• 23:5823:58, 11 December 2023 diff hist −19‎ Hoffman2:Software Tools ‎ →‎HCP Benchwork
• 23:5723:57, 11 December 2023 diff hist +58‎ Hoffman2:Software Tools:HCPBench ‎No edit summary
• 23:5323:53, 11 December 2023 diff hist +289‎ N Hoffman2:Software Tools:HCPBench ‎ Created page with "If you are experiencing crashing trying to load hcp (mesa or other related crashing errors) do the following: cd ~ wget https://www.humanconnectome.org/storage/app/media/workbench/workbench-rh_linux64-v1.5.0.zip unzip workbench-rh_linux64-v1.5.0.zip cd workbench/exe_rh_linux64/ ./wb_view"
• 23:4923:49, 11 December 2023 diff hist +61‎ Hoffman2:Software Tools ‎ →‎HCP Benchwork

24 October 2023

• 18:3818:38, 24 October 2023 diff hist −27‎ Hoffman2:Software Tools:NDATools ‎ →‎Load modules current

19 October 2023

• 22:1922:19, 19 October 2023 diff hist −1‎ Staglin MR Suite ‎No edit summary

11 October 2023

• 19:4219:42, 11 October 2023 diff hist −109‎ Hoffman2:Software Tools:Fix ‎ →‎Use Fix in Hoffman current
• 19:3219:32, 11 October 2023 diff hist −174‎ Hoffman2:Software Tools:BrainAgeR ‎No edit summary current

22 August 2023

• 18:1918:19, 22 August 2023 diff hist +263‎ Hoffman2:Software Tools:FMRIprep ‎No edit summary current
• 18:1618:16, 22 August 2023 diff hist +215‎ Hoffman2:Software Tools:FSL MRS ‎No edit summary current
• 18:1218:12, 22 August 2023 diff hist 0‎ N Hoffman2:Software Tools:FSL MRS ‎ Created blank page
• 18:1118:11, 22 August 2023 diff hist +44‎ Hoffman2:Software Tools ‎ →‎FSL_MRS
• 17:1617:16, 22 August 2023 diff hist +395‎ Hoffman2:Software Tools ‎No edit summary
• 17:1017:10, 22 August 2023 diff hist +72‎ Hoffman2:Software Tools ‎ →‎FMRIprep

6 April 2023

• 16:5616:56, 6 April 2023 diff hist +203‎ Hoffman2 maintenance and Issues ‎ →‎Issues and Solutions current

10 March 2023

• 01:0301:03, 10 March 2023 diff hist +54‎ Hoffman2:Software Tools:ggseg ‎ →‎From a Hoffman2 node current
• 01:0201:02, 10 March 2023 diff hist +73‎ Hoffman2:Software Tools ‎ →‎ggseg
• 00:5700:57, 10 March 2023 diff hist +601‎ N Hoffman2:Software Tools:ggseg ‎ Created page with "==From a Hoffman2 node== Load the required modules: <pre> module load R/4.2.2 module load anaconda3/2022.05 module load freesurfer/7.3.2 module load proj/7.1.1 module loa..."
• 00:5700:57, 10 March 2023 diff hist −1‎ Hoffman2:Software Tools ‎ →‎ggseg
• 00:5600:56, 10 March 2023 diff hist −320‎ Hoffman2:Software Tools ‎ →‎ggseg
• 00:5400:54, 10 March 2023 diff hist +252‎ Hoffman2:R:ggsegs ‎ →‎From a Hoffman2 node current
• 00:5000:50, 10 March 2023 diff hist +666‎ Hoffman2:Software Tools ‎No edit summary

27 February 2023

• 21:0921:09, 27 February 2023 diff hist +70‎ Hoffman2 ‎ →‎R current
• 21:0421:04, 27 February 2023 diff hist +351‎ N Hoffman2:R:ggsegs ‎ Created page with " ==From a Hoffman2 node== module R/4.2.2 anaconda3/2022.05 freesurfer/7.3.2 proj/7.1.1 gdal/3.1.3 export PATH=$PATH:/u/project/CCN/apps/conda/rh7/R4.2.2_ggseg:/u/project/CC..."

14 February 2023

• 00:1600:16, 14 February 2023 diff hist +466‎ Hoffman2 maintenance and Issues ‎ →‎Issues and Solutions
• 00:1300:13, 14 February 2023 diff hist +1‎ Hoffman2:Software Tools ‎No edit summary
• 00:1300:13, 14 February 2023 diff hist −250‎ Hoffman2:Software Tools ‎No edit summary
• 00:0900:09, 14 February 2023 diff hist +331‎ Hoffman2:Software Tools ‎No edit summary

19 August 2022

• 18:2418:24, 19 August 2022 diff hist +1‎ Hoffman2:Accessing the Cluster ‎ →‎GUI-Enabled SSH current
• 18:2218:22, 19 August 2022 diff hist +7‎ Hoffman2:Accessing the Cluster ‎ →‎GUI-Enabled SSH
• 18:2118:21, 19 August 2022 diff hist +120‎ Hoffman2:Accessing the Cluster ‎ →‎GUI-Enabled SSH