Principles of Neuroimaging B - 2013: Difference between revisions

From Center for Cognitive Neuroscience
Jump to navigation Jump to search
(Created page with "[http://www.doodle.com/f7a8mssf4y5hik8h Help Session Doodle Link]")
 
m (34 revisions)
 
(33 intermediate revisions by 2 users not shown)
Line 1: Line 1:
[http://www.doodle.com/f7a8mssf4y5hik8h Help Session Doodle Link]
=Principles of Neuroimaging B, Winter, 2012 - Class Schedule and Syllabus=
 
:'''[[Principles_of_Neuroimaging_-_2012-2013 | Main course page for Principles of Neuroimaging (2012-13)]]'''
 
:'''[[Principles_of_Neuroimaging_A_-_2012 | M284A Principles of Neuroimaging A]]'''
 
*[[Notes for Instructors]]
 
 
==[http://doodle.com/pvskg5w3kh6wa86n Class Time Doodle Link]==
 
==[http://www.doodle.com/f7a8mssf4y5hik8h Help Session Doodle Link]==
 
=Week 1 Magnetic Resonance Imaging=
Magnetic Resonance Imaging (MRI) is probably the most influential and most felxible current means of imaging the human brain. It features a vast number of separable contrast mechanisms, and a near ideal combination of non-invasiveness, safety, resolution and metric accuracy. However, it is extraordinarily expensive and has limited temporal resolution, especially for functional studies
 
 
==''Monday 1/7/13'' - MRI. ''Speaker'':  [http://www.brainmapping.org/MarkCohen Cohen]==
OUTLINE
''Required Readings''
:*[[media:MRIforPNIB.pdf‎ | MRI Slides]]
:*[http://www.cis.rit.edu/htbooks/mri/ These notes] by Joseph Hornak are highly professional and complete coverage of MRI.
:*[http://www.imaios.com/en/e-Courses/e-MRI eMRI] is another excellent online MRI learning resource
:*[http://www.brainmapping.org/NITP/PNA/Readings/Hahn1950.pdf Erwin Hahn - Spin Echoes: ''Essential reading for the MRI community'']
[[Image:HahnFig1.png]]
''above'': Figure 1 from Hahn, 1950
 
''Suggested Further Reading''
[[image:PSatSeq.jpg|right]]
 
==''Wednesday 1/9/13'' - MRI II. ''Speaker'': [http://www.brainmapping.org/MarkCohen Cohen]==
OUTLINE
''Required Readings''
:*[[media:MRIforPNIB.pdf‎ | MRI Slides (same as 1/7/13)]]
 
 
''Suggested Further Reading''
:*READING
 
<!-- :*[[media:PS1-PNIB2011.pdf | Problem Set 1]] -->
 
 
=Week 2 MRI Applications=
 
==''Monday 1/14/13'' - Functional MRI. ''Speaker'':  [http://www.brainmapping.org/MarkCohen Cohen]==
 
===Videos - Please Right Click and Save rather than Stream ===
 
:*[http://ccn.ucla.edu/media/20130114-part1.mp4 Lecture Part 1]
:*[http://ccn.ucla.edu/media/20130114-part2.mp4 Lecture Part 2]
 
==''Wednesday 1/16/13'' - Functional MRI. ''Speaker'':  [http://www.brainmapping.org/MarkCohen Cohen]==
OUTLINE
''Required Readings''
:*
 
''Suggested Further Reading''
:*[[Media:DTIHageman.pdf | Hageman DTI Slides]]
:*[[Media:NICourse_DTILecture4Post_11-01-26.pdf | Hageman DTI Notes 2/26/12]]
:*[http://www.ncbi.nlm.nih.gov/pubmed/15037456?dopt=Citation Diffusion tensor imaging of cerebral white matter: a pictorial review of physics, fiber tract anatomy, and tumor imaging patterns AJNR Am J Neuroradiol. 2004 Mar;25(3):356-69]
 
:Sadly, the library does not have a subscription for the journals below (Mark has copies on reserve in his office):
:*[http://www.ncbi.nlm.nih.gov/pubmed/8661285?dopt=Citation Microstructural and physiological features of tissues elucidated by quantitative-diffusion-tensor MRI. J Magn Reson B. 1996 Jun;111(3):209-19]
:*[http://www.ncbi.nlm.nih.gov/pubmed/16950152?dopt=Citation Principles of diffusion tensor imaging and its applications to basic neuroscience research. Neuron. 2006 Sep 7;51(5):527-39]
 
''Suggested Further Reading''
:*READING
 
=Week 3 =
 
==''Monday 1/21/13'' - NO CLASS - Martin Luther King Day ==
 
==''Wednesday 1/23/13'' - Functional MRI. ''Speaker'':  [http://www.brainmapping.org/MarkCohen Cohen]==
 
=Week 4 PET Imaging=
 
==''Monday 1/28/13'' - PET. ''Speaker'':  [http://faculty.pharmacology.ucla.edu/institution/personnel?personnel_id=45558 Magnus Dahlboun]==
 
:*[[Media:PS1_–_PNIB2013.pdf‎ | Problem Set 1 Due 02/06/2013 by 5PM]]
 
==''Wednesday 1/30/13'' - PET. ''Speaker'':  [http://www.semel.ucla.edu/profile/edythe-london Edythe London]==
 
:*[[Media:NITP_PET_1-30-13.pdf | Dr. Edythe London PET Slides]]
 
=Week 5 =
 
==''Monday 2/4/13'' -  . ''Speaker'':  ==
 
 
==''Wednesday 2/6/13'' - No Lecture - Optional Help Session  ==
 
 
=Week 6 =
 
==''Monday 2/11/13'' -  Neuromodulation . ''Speaker'':  [http://www.semel.ucla.edu/profile/alexander-bystritsky Alexander Bystritsky] ==
 
 
 
==''Wednesday 2/13/13'' - . ''Speaker'':  ==
 
=Week 7 =
 
==''Monday 2/18/13'' - NO CLASS - Presidents Day ==
 
==''Wednesday 2/20/13'' - Transcranial Magneto Stimulation (TMS). ''Speaker'': [http://faculty.bri.ucla.edu/institution/personnel?personnel_id=121107 Allan Wu]==
'Required Readings''
:* [[media:WuTMSFeb2013.pdf | Wu 2013 Lecture slides]]
:* [[media:TMSSafetyAndEthics-Rossi.pdf | TMS Safety and Ethics - Rossi, 2009]]
:* [http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T0J-50CV801-1&_user=4423&_coverDate=01%2F31%2F2011&_rdoc=1&_fmt=high&_orig=search&_origin=search&_sort=d&_docanchor=&view=c&_acct=C000059605&_version=1&_urlVersion=0&_userid=4423&md5=f9fa3c7d63942dfb3c74e047a1f848bc&searchtype=a | M Sandrini, C Umilta and E Rusconi, “''The use of transcranial magnetic stimulation in cognitive neuroscience: a new synthesis of methodological issues.''” '''Neurosci Biobehav Rev''',  '''35'''(3): p. 516-536. 2011]
 
''Suggested Further Reading''
 
:* [[media:WuTMS-05-04-10.pdf | Handout for Wu TMS Lecture, 2010]]
 
Once upon a time we demonstrated that this sort of magnetic stimulation can take place in the MRI machines:
:*[http://onlinelibrary.wiley.com/doi/10.1002/mrm.1910140226/pdf MS Cohen, RM Weisskoff, RR Rzedzian and HL Kantor, “Sensory stimulation by time-varying magnetic fields.” Magnetic Resonance in Medicine,  14(2): p. 409-414. 1990]
 
=Week 8 =
 
==''Monday 2/25/13'' - Functional Connectivity. ''Speaker'': Jesse Brown ==
 
 
==''Wednesday 2/27/13'' - Simultaneous multimodal neuroimaging. ''Speaker'': Mark Cohen ==
 
=== Room CHS 13-105, Near the biomedical library ===
 
:* [[Media:MultiModalNITP2013_sm.pdf‎ | Multimodal neuroimaging lecture slides]]
 
=Week 9 =
 
==''Monday 3/4/13'' - Multi-voxel Pattern Analysis . ''Speaker'':  Jesse Rissman==
 
:* [[Media:Rissman_MVPA_for_Principles_of_Neuroimaging_course_(March_2013).pdf‎ | Multi-voxel Pattern Analysis Lecture Slides]]
 
=== Room CHS 13-105 ===
 
==''Wednesday 3/6/13'' - . ''Speaker'': Martin Monti  ==
 
:* [[Media:NITP2012_MMonti_01_ExperimentalDesign_Advanced_print.pdf‎ | Advanced Experimental Design Lecture Slides]]
 
=== Room CHS 16-154 ===
 
=Week 10 =
 
==''Monday 3/11/13'' - NO CLASS -  ==
 
==''Wednesday 3/13/13'' - . ''Speaker'':  Agatha Lenartowicz ==
 
:* [[Media:EEGNeurophys_130313.pdf | EEG Neurophysiology Lecture Slides]]
 
=== Room CHS 16-154 ===

Latest revision as of 03:41, 16 January 2014

Principles of Neuroimaging B, Winter, 2012 - Class Schedule and Syllabus

Main course page for Principles of Neuroimaging (2012-13)
M284A Principles of Neuroimaging A


Class Time Doodle Link

Help Session Doodle Link

Week 1 Magnetic Resonance Imaging

Magnetic Resonance Imaging (MRI) is probably the most influential and most felxible current means of imaging the human brain. It features a vast number of separable contrast mechanisms, and a near ideal combination of non-invasiveness, safety, resolution and metric accuracy. However, it is extraordinarily expensive and has limited temporal resolution, especially for functional studies


Monday 1/7/13 - MRI. Speaker: Cohen

OUTLINE Required Readings

HahnFig1.png above: Figure 1 from Hahn, 1950

Suggested Further Reading

Wednesday 1/9/13 - MRI II. Speaker: Cohen

OUTLINE Required Readings


Suggested Further Reading

  • READING


Week 2 MRI Applications

Monday 1/14/13 - Functional MRI. Speaker: Cohen

Videos - Please Right Click and Save rather than Stream

Wednesday 1/16/13 - Functional MRI. Speaker: Cohen

OUTLINE Required Readings

Suggested Further Reading

Sadly, the library does not have a subscription for the journals below (Mark has copies on reserve in his office):

Suggested Further Reading

  • READING

Week 3

Monday 1/21/13 - NO CLASS - Martin Luther King Day

Wednesday 1/23/13 - Functional MRI. Speaker: Cohen

Week 4 PET Imaging

Monday 1/28/13 - PET. Speaker: Magnus Dahlboun

Wednesday 1/30/13 - PET. Speaker: Edythe London

Week 5

Monday 2/4/13 - . Speaker:

Wednesday 2/6/13 - No Lecture - Optional Help Session

Week 6

Monday 2/11/13 - Neuromodulation . Speaker: Alexander Bystritsky

Wednesday 2/13/13 - . Speaker:

Week 7

Monday 2/18/13 - NO CLASS - Presidents Day

Wednesday 2/20/13 - Transcranial Magneto Stimulation (TMS). Speaker: Allan Wu

'Required Readings

Suggested Further Reading

Once upon a time we demonstrated that this sort of magnetic stimulation can take place in the MRI machines:

Week 8

Monday 2/25/13 - Functional Connectivity. Speaker: Jesse Brown

Wednesday 2/27/13 - Simultaneous multimodal neuroimaging. Speaker: Mark Cohen

Room CHS 13-105, Near the biomedical library

Week 9

Monday 3/4/13 - Multi-voxel Pattern Analysis . Speaker: Jesse Rissman

Room CHS 13-105

Wednesday 3/6/13 - . Speaker: Martin Monti

Room CHS 16-154

Week 10

Monday 3/11/13 - NO CLASS -

Wednesday 3/13/13 - . Speaker: Agatha Lenartowicz

Room CHS 16-154