Principles of Neuroimaging B - 2017: Difference between revisions
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Principles of Neuroimaging B, Winter, | Principles of Neuroimaging B, Winter, 2017 - Class Schedule and Syllabus | ||
== This schedule is a draft only and ''will'' change!== | == This schedule is a draft only and ''will'' change!== | ||
Line 19: | Line 19: | ||
:'''NOTE:''' if you subscribe for a Scribd account for a day, you can download as many documents as you like for one fee. | :'''NOTE:''' if you subscribe for a Scribd account for a day, you can download as many documents as you like for one fee. | ||
=Week 1: Magnetic Resonance Imaging= | =Week 1: Magnetic Resonance Imaging: Fundamentals= | ||
Magnetic Resonance Imaging (MRI) is probably the most influential and most flexible current means of imaging the human brain. It features a vast number of separable contrast mechanisms, and a near ideal combination of non-invasiveness, safety, resolution and metric accuracy. However, it is extraordinarily expensive and has limited temporal resolution, especially for functional studies | |||
OUTLINE | |||
''Required Readings'' | |||
:*[[media:MRIforPNIB2014_sm.pdf | MRI Slides]] | |||
:*[http://www.cis.rit.edu/htbooks/mri/ These notes] by Joseph Hornak are highly professional and complete coverage of MRI. | |||
:*[http://www.imaios.com/en/e-Courses/e-MRI eMRI] is another excellent online MRI learning resource | |||
:*[http://www.brainmapping.org/NITP/PNA/Readings/Hahn1950.pdf Erwin Hahn - Spin Echoes: ''Essential reading for the MRI community''] | |||
[[Image:HahnFig1.png]] | |||
''above'': Figure 1 from Hahn, 1950 | |||
''Suggested Further Reading'' | |||
[[image:PSatSeq.jpg|right]] | |||
''Required Readings'' | |||
:*[[media:MRIforPNIB2014_sm.pdf | MRI Slides]] | |||
==''Monday 1/9/17'' == | ==''Monday 1/9/17'' == | ||
===- | ===- MR Physics I. ''Speaker'': [https://www.brainmapping.org/MarkCohen/aboutmark.html Mark Cohen]=== | ||
==''Wednesday 1/11/17'' == | ==''Wednesday 1/11/17'' == | ||
===- MR | ===- MR Physics II. ''Speaker'': [https://www.brainmapping.org/MarkCohen/aboutmark.html Mark Cohen]=== | ||
=Week 2: MRI Techniques= | =Week 2: MRI Techniques= | ||
Line 31: | Line 50: | ||
==''Wednesday 1/18/17'' == | ==''Wednesday 1/18/17'' == | ||
===-MR | ===- MR Spatial Encoding Q&A. ''Speaker'' Cameron Rodriguez=== | ||
=Week 3: | =Week 3: MRI Applications = | ||
==''Monday 1/23/17'' == | ==''Monday 1/23/17'' == | ||
===- | ===- MR Pulse Sequences and Parameters ''Speaker'' [https://www.brainmapping.org/MarkCohen/aboutmark.html Mark Cohen]=== | ||
==''Wednesday 1/25/17'' == | ==''Wednesday 1/25/17'' == | ||
===- | ===- MR Applications (MR, fMRI, DTI, ASL, Spectroscopy). ''Speaker'' [https://www.brainmapping.org/MarkCohen/aboutmark.html Mark Cohen]=== | ||
=Week 4: | =Week 4: Multimodal Imaging= | ||
==''Monday 1/30/17'' == | ==''Monday 1/30/17 CLASS IN SEMEL 67-415''== | ||
===- | ===- Multimodal I ''Speaker'' Cameron Rodriguez=== | ||
==''Wednesday 2/1/17'' == | ==''Wednesday 2/1/17'' == | ||
===- | ===- Multimodal II ''Speaker'' Agatha Lenartowicz=== | ||
:*[[media:eegfmritalk.pdf | Lecture Slides]] | |||
:*[[media: | :*[[media:chapter7.pdf | EEG Instrumentation]] | ||
:*[[media: | :*[[media:chapter8.pdf | EEG Quality I]] | ||
:*[[media:chapter9.pdf | EEG Quality II]] | |||
:* | :*[[media:chapter10.pdf | Image Quality]] | ||
=Week 5: | =Week 5: Review = | ||
==''Monday 2/6/17'' == | ==''Monday 2/6/17''== | ||
===- | ===- Q&A Class === | ||
==''Wednesday 2/8/17'' == | ==''Wednesday 2/8/17''== | ||
===- | ===- Midterm Review=== | ||
=MIDTERM= | =MIDTERM= | ||
=Week 6: | |||
=Week 6: Image Processing= | |||
==''Monday 2/13/17'' == | ==''Monday 2/13/17'' == | ||
===Midterm Review=== | ===cont. Midterm Review=== | ||
== | ==''Wednesday 2/15/17'' == | ||
===- | ===-Image Processing I. ''Speaker'' Cameron Rodriguez=== | ||
=Week 7: | =Week 7: Image Analysis= | ||
==''Monday 2/20/17'' == | ==''Monday 2/20/17'' == | ||
===President’s Day Holiday No Class=== | ===President’s Day Holiday No Class=== | ||
==''Wednesday 2/22/17'' == | ==''Wednesday 2/22/17'' == | ||
===- | ===- Image Processing II. ''Speaker'' Agatha Lenartowicz=== | ||
=Week 8: | =Week 8: Image Analysis Cont.= | ||
==''Monday 2/27/17'' == | ==''Monday 2/27/17 CLASS IN SEMEL 67-415'' == | ||
=== | ===Analysis I ''Speaker'' Agatha Lenartowicz=== | ||
==''Wednesday 3/1/17'' == | ==''Wednesday 3/1/17'' == | ||
===- | ===- Analysis II ''Speaker'' Agatha Lenartowicz=== | ||
=Week 9: | =Week 9: Brain Decoding= | ||
==''Monday 3/6/17'' == | ==''Monday 3/6/17'' == | ||
===- | ===-ML I: Dimension Reduction, Machine Learning Fundamentals ''Speaker'' Wesley Kerr, Ph.D.=== | ||
==''Wednesday 3/8/17'' == | ==''Wednesday 3/8/17'' == | ||
===- | ===- MLII: Machine Learning cont. ''Speaker'' Wesley Kerr, Ph.D.=== | ||
=Week 10: Review= | =Week 10: Review= | ||
==''Monday 3/13/17'' == | ==''Monday 3/13/17'' == | ||
===- | ===-TBD ''Speaker'' TBD=== | ||
==''Wednesday 3/15/17'' == | ==''Wednesday 3/15/17'' == | ||
===-TBD=== | ===-Final Exam Review. ''Speaker'' TBD=== | ||
Latest revision as of 04:01, 9 February 2017
Principles of Neuroimaging B, Winter, 2017 - Class Schedule and Syllabus
This schedule is a draft only and will change!
Course Reading
Required Reading
- Signal Processing for Neuroscientists by Wim van Drongelen
- This can be found as a PDF on scribd.com, for a small fee of $8.99
Supplemental Reading
- Matlab for Neuroscientists
- Link for download found here for a small fee: http://www.scribd.com/doc/88212458/Matlab-Matlab-for-Neuroscientists
- Cartoon Guide to Statistics
- Link for download found here for a small fee: http://www.scribd.com/doc/148072668/Cartoon-Guide-to-Statistics
- NOTE: if you subscribe for a Scribd account for a day, you can download as many documents as you like for one fee.
Week 1: Magnetic Resonance Imaging: Fundamentals
Magnetic Resonance Imaging (MRI) is probably the most influential and most flexible current means of imaging the human brain. It features a vast number of separable contrast mechanisms, and a near ideal combination of non-invasiveness, safety, resolution and metric accuracy. However, it is extraordinarily expensive and has limited temporal resolution, especially for functional studies
OUTLINE
Required Readings
- MRI Slides
- These notes by Joseph Hornak are highly professional and complete coverage of MRI.
- eMRI is another excellent online MRI learning resource
- Erwin Hahn - Spin Echoes: Essential reading for the MRI community
above: Figure 1 from Hahn, 1950
Suggested Further Reading
Required Readings