Hoffman2:Software Tools:ggseg
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Load the required modules:
module load R/4.2.2 module load anaconda3/2022.05 module load freesurfer/7.3.2 module load proj/7.1.1 module load gdal/3.1.3
Add the path
export PATH=$PATH:/u/project/CCN/apps/conda/rh7/R4.2.2_ggseg:/u/project/CCN/apps/R_libs/rh7/4.2.2_ggseg
Activate the conda environment:
conda activate /u/project/CCN/apps/conda/rh7/R4.2.2_ggseg
Launch R with the command "R" and enter the following:
.libPaths("/u/project/CCN/apps/R_libs/rh7/4.2.2_ggseg")
Load the library in R
library(ggsegExtra)