Hoffman2:Software Tools:dmriprep

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dmriprep

module load apptainer
singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments
singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep data/bids_root/ out/ participant -w work/

Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage

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