Hoffman2:Software Tools:dmriprep: Difference between revisions
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(Created page with "===dmriprep=== module load apptainer singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif data/bids_root/ out/ participant -w work/ Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage") |
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module load apptainer | module load apptainer | ||
singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments | singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments | ||
singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif data/bids_root/ out/ participant -w work/ | singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep data/bids_root/ out/ participant -w work/ | ||
Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage | Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage | ||
Revision as of 17:02, 13 December 2023
dmriprep
module load apptainer singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep -h #will list program arguments singularity exec /u/project/CCN/apps/dmriprep/dfmriprep.sif dmriprep data/bids_root/ out/ participant -w work/
Comprehensive documentation on dmriprep can be found at: https://www.nipreps.org/dmriprep/usage.html#usage