BIDs configuration file: Difference between revisions
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'''SUBJ''' will be converted automatically to the subject ID | '''SUBJ''' will be converted automatically to the subject ID | ||
Revision as of 18:01, 30 January 2020
BIDs configuration file
BIDs configuration file is used to specify the naming convention for your data file in Hoffman2:Scripts:setup_subject_3.
This file should have the following format for all files you want to be converted to BIDs style names.
original_File_Name sub-SUBJ_Name original_File_Name sub-SUBJ_Name original_File_Name sub-SUBJ_Name ...
The original_File_Name and the sub-SUBJ_Name are separated by a space.
SUBJ will be converted automatically to the subject ID (For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )
The "Name" in "sub-SUBJ_Name" should be replace by the string following the BIDs format rules.
Example:
gre_fieldmap_5 sub-SUBJ_fmap_magnitude gre_fieldmap_6 sub-SUBJ_fmap_phasediff Task_Block_1_9 sub-SUBJ_task1 Task_Block_2_10 sub-SUBJ_task2 MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-SUBJ_T1w