Difference between revisions of "Hoffman2:Software Tools: FMRIprep"

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Line 8: Line 8:
 
  module load ica-aroma
 
  module load ica-aroma
 
  module load itksnap/3.6.0-RC1.QT4
 
  module load itksnap/3.6.0-RC1.QT4
 +
 +
export PATH=/u/project/CCN/apps/c3d/c3d-1.0.0-Linux-x86_64/bin/:$PATH

Revision as of 19:10, 22 January 2020

For using FMRIprep module, the following modules are needed as well

module load fsl/5.0.9
module load python/3.7.2
module load freesurfer/6.0.0
module load ants/ants-2.2.0
module load afni/19.0.15
module load ica-aroma
module load itksnap/3.6.0-RC1.QT4

export PATH=/u/project/CCN/apps/c3d/c3d-1.0.0-Linux-x86_64/bin/:$PATH