Difference between revisions of "Hoffman2:Software Tools: FMRIprep"
From Center for Cognitive Neuroscience
| Line 8: | Line 8: | ||
module load ica-aroma | module load ica-aroma | ||
module load itksnap/3.6.0-RC1.QT4 | module load itksnap/3.6.0-RC1.QT4 | ||
| + | |||
| + | export PATH=/u/project/CCN/apps/c3d/c3d-1.0.0-Linux-x86_64/bin/:$PATH | ||
Revision as of 19:10, 22 January 2020
For using FMRIprep module, the following modules are needed as well
module load fsl/5.0.9 module load python/3.7.2 module load freesurfer/6.0.0 module load ants/ants-2.2.0 module load afni/19.0.15 module load ica-aroma module load itksnap/3.6.0-RC1.QT4
export PATH=/u/project/CCN/apps/c3d/c3d-1.0.0-Linux-x86_64/bin/:$PATH
