Hoffman2:Software Tools:HALfpipe: Difference between revisions
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| Line 9: | Line 9: | ||
halfpipe_1.1.1.sif | halfpipe_1.1.1.sif | ||
To use it | To use it, | ||
module load singularity | module load singularity | ||
singularity run --no-home --cleanenv /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif | singularity run --no-home --cleanenv /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif | ||
* Note: Singularity needs to be run in a work node. | |||
More documents are on its [https://github.com/HALFpipe/HALFpipe Github page] | More documents are on its [https://github.com/HALFpipe/HALFpipe Github page] | ||
Revision as of 23:04, 17 December 2021
ENIGMA HALfpipe
Singularity image for HALfpipe in Hoffman2 is located here
/u/project/CCN/apps/halfpipe/singularity/
The current version is
halfpipe_1.1.1.sif
To use it,
module load singularity singularity run --no-home --cleanenv /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif
- Note: Singularity needs to be run in a work node.
More documents are on its Github page