Hoffman2:Software Tools:HALfpipe: Difference between revisions

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Singularity image for HALfpipe in Hoffman2 is located here
Singularity image for HALfpipe in Hoffman2 is located here


/u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif
/u/project/CCN/apps/halfpipe/singularity/


To use it
The current version is
 
halfpipe_1.1.1.sif
 
To use it,


  module load singularity
  module load singularity
  singularity run --no-home --cleanenv /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif
  singularity run --no-home --cleanenv --bind /:/ext /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif  
 
* Note: Singularity needs to be run in a work node.


More documents are on its [https://github.com/HALFpipe/HALFpipe Github page]
More documents are on its [https://github.com/HALFpipe/HALFpipe Github page]

Latest revision as of 23:06, 17 December 2021

ENIGMA HALfpipe

Singularity image for HALfpipe in Hoffman2 is located here

/u/project/CCN/apps/halfpipe/singularity/

The current version is

halfpipe_1.1.1.sif

To use it,

module load singularity
singularity run --no-home --cleanenv --bind /:/ext /u/project/CCN/apps/halfpipe/singularity/halfpipe_1.1.1.sif 
  • Note: Singularity needs to be run in a work node.

More documents are on its Github page