Hoffman2:Software Tools:CentOS 7: Difference between revisions
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===Request a CentOS 7 node with batch mode=== | ===Request a CentOS 7 node with batch mode=== | ||
It's similar as interactive mode, 'rh7' is needed for -l option | It's similar as interactive mode, 'rh7' is needed for -l option | ||
#$ -l rh7,h_rt=2:00:00,h_data=4G | #$ -l rh7,h_rt=2:00:00,h_data=4G |
Revision as of 21:56, 12 August 2021
Hoffman CentOS 7
At this point, partial of Hoffman's work nodes have been upgraded to CentOS 7.
CCN Apps for CentOS 7
To use CCN applications in Hoffman2, you'll need to specify the new module files for CentOS 7 for interactive mode or batch mode
For interactive mode
you need to edit your ~/bashrc or ~/bash_profile
gedit ~/bashrc
comment out
#module use /u/project/CCN/apps/modulefiles
Add a line to use modulefiles_rh7
module use /u/project/CCN/apps/modulefiles_rh7
Once you complete editing, start an interactive mode for CentOS 7 node
For batch mode
Add the following line to your batch job file
module use /u/project/CCN/apps/modulefiles_rh7
Request a CentOS 7 node with interactive mode
To request a work node with CentOS 7, you'll need to use 'rh7' after -l option, for example
qrsh -l rh7,h_data=4G,h_rt=2:00:00
Request a CentOS 7 node with batch mode
It's similar as interactive mode, 'rh7' is needed for -l option
#$ -l rh7,h_rt=2:00:00,h_data=4G