Hoffman2:Scripts:clean up.sh: Difference between revisions
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(Created page with "This script is used to clean up certain FSL processing files. 1. tsplot 2. feat folders (+.feat) 3. FSL stdout and stderr files (such as *.e28678.8, *.o4436) 4. files end with .con .grp .Icon .mat Load the module first module load ccnscripts For clean up feat folders, clean_up.sh -f PATH/TO/FOLDER For .o and .e files clean_up.sh -o PATH/TO/FOLDER For tsplot clean_up.sh -t PATH/TO/FOLDER") |
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This script is used to clean up | This script is used to clean up the following files. | ||
1. tsplot | 1. tsplot | ||
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For clean up feat folders, | For clean up feat folders, | ||
clean_up.sh -f PATH/TO/FOLDER | clean_up.sh -f /PATH/TO/FOLDER | ||
For .o and .e files | For .o and .e files | ||
clean_up.sh -o PATH/TO/FOLDER | clean_up.sh -o /PATH/TO/FOLDER | ||
For tsplot | For tsplot | ||
clean_up.sh -t PATH/TO/FOLDER | clean_up.sh -t /PATH/TO/FOLDER | ||
This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH folder | |||
Revision as of 22:26, 19 May 2025
This script is used to clean up the following files.
1. tsplot 2. feat folders (+.feat) 3. FSL stdout and stderr files (such as *.e28678.8, *.o4436) 4. files end with .con .grp .Icon .mat
Load the module first
module load ccnscripts
For clean up feat folders,
clean_up.sh -f /PATH/TO/FOLDER
For .o and .e files
clean_up.sh -o /PATH/TO/FOLDER
For tsplot
clean_up.sh -t /PATH/TO/FOLDER
This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH folder