User contributions for Hwang
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28 March 2024
- 22:0322:03, 28 March 2024 diff hist −1 Hoffman2:Software Tools: NDATools →Start an interactive mode current
- 22:0322:03, 28 March 2024 diff hist +3 Hoffman2:Software Tools: NDATools →Use conda env
- 21:5921:59, 28 March 2024 diff hist +7 Hoffman2:Software Tools: NDATools →Generate Temporary Tokens
- 21:5921:59, 28 March 2024 diff hist +37 Hoffman2:Software Tools: NDATools →Load modules
6 March 2024
- 22:5322:53, 6 March 2024 diff hist −7 Hoffman2:Data Transfer →General Usage current
- 22:5222:52, 6 March 2024 diff hist −66 Hoffman2:Data Transfer →General Usage
19 January 2024
- 18:3018:30, 19 January 2024 diff hist +19 Dicom →From SSH command line
1 November 2023
- 00:2100:21, 1 November 2023 diff hist +76 Hoffman2:Python →CCN existing Conda Environments current
- 00:2000:20, 1 November 2023 diff hist +4 Hoffman2:Python →Use Conda for Python virtual environment
22 August 2023
28 July 2023
- 20:1420:14, 28 July 2023 diff hist +20 X2go No edit summary current
- 20:1320:13, 28 July 2023 diff hist +14 X2go No edit summary
6 June 2023
- 23:1223:12, 6 June 2023 diff hist +161 CCN Workshops →CCN Workshops current
3 April 2023
- 21:4021:40, 3 April 2023 diff hist 0 Hoffman2:Python No edit summary
17 March 2023
- 19:3919:39, 17 March 2023 diff hist −72 Hoffman2:Software Tools:downloadcmd No edit summary current
- 19:3819:38, 17 March 2023 diff hist +1 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:3719:37, 17 March 2023 diff hist +74 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:3019:30, 17 March 2023 diff hist +12 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:2919:29, 17 March 2023 diff hist −2 Hoffman2:Software Tools:downloadcmd →A wrapper script of NDATools has been developed by our CCN member Dylan Hughes.
- 19:2819:28, 17 March 2023 diff hist −10 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:2519:25, 17 March 2023 diff hist +14 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:2419:24, 17 March 2023 diff hist +8 Hoffman2:Software Tools:downloadcmd No edit summary
- 19:1919:19, 17 March 2023 diff hist +5,589 N Hoffman2:Software Tools:downloadcmd Created page with "A wrapper script of NDATools has been developed by our CCN user Dylan Hughes. Here's the manual, Downloading brains from ABCD, by Dylan Hughes, 12/05/2022 This will help yo..."
- 19:1719:17, 17 March 2023 diff hist +14 Hoffman2:Software Tools:NDATools No edit summary
- 19:1619:16, 17 March 2023 diff hist +48 Hoffman2:Software Tools:NDATools No edit summary
- 19:1219:12, 17 March 2023 diff hist −7 Hoffman2:Software Tools:NDATools →Load modules
3 January 2023
16 December 2022
- 23:0223:02, 16 December 2022 diff hist +251 N Hoffman2:Software Tools:BrainAgeR Created page with " The following modules are needed for using BrainAgeR module load fsl module load matlab module load R/3.6.1 module load brainager export spm_dir=/u/project/CCN/apps/bra..."
- 23:0123:01, 16 December 2022 diff hist +508 Hoffman2:Software Tools No edit summary
7 December 2022
- 20:4220:42, 7 December 2022 diff hist −111 Hoffman2:Software Tools: NDATools →Download Data
- 20:4020:40, 7 December 2022 diff hist −2 Hoffman2:Software Tools: NDATools →Download Data
- 20:3820:38, 7 December 2022 diff hist +24 Hoffman2:Software Tools: NDATools →Download Data
- 20:3720:37, 7 December 2022 diff hist −25 Hoffman2:Software Tools: NDATools →Download Data
- 20:3520:35, 7 December 2022 diff hist +276 Hoffman2:Software Tools: NDATools →Download Data
- 20:3320:33, 7 December 2022 diff hist −24 Hoffman2:Software Tools: NDATools →Download Data
- 20:3220:32, 7 December 2022 diff hist +934 Hoffman2:Software Tools: NDATools →Download Data
- 20:2920:29, 7 December 2022 diff hist 0 Hoffman2:Software Tools: NDATools →Load modules
7 October 2022
30 September 2022
- 17:2917:29, 30 September 2022 diff hist +115 Hoffman2:Batch Mode →Part 3: Call your job script current
- 17:2717:27, 30 September 2022 diff hist +78 Hoffman2:Batch Mode No edit summary
- 17:2517:25, 30 September 2022 diff hist +8 Hoffman2:Batch Mode →Part 3: Call your job script
- 17:2517:25, 30 September 2022 diff hist +238 Hoffman2:Batch Mode →Part 3: Call your job script
- 17:2217:22, 30 September 2022 diff hist +20 Hoffman2:Batch Mode →Part 2: Setup the Environment
- 17:2217:22, 30 September 2022 diff hist +7 Hoffman2:Batch Mode →Part 1: Request Computing Resource
- 17:2117:21, 30 September 2022 diff hist −17 Hoffman2:Batch Mode →Part 3: Call your job script
- 17:2117:21, 30 September 2022 diff hist +11 Hoffman2:Batch Mode →Part 3: Submit your job script
- 17:1417:14, 30 September 2022 diff hist +16 Hoffman2:Batch Mode →Part 3: Call your job script
26 July 2022
- 23:2723:27, 26 July 2022 diff hist +1 Hoffman2:Software Tools:brms No edit summary current
- 23:2523:25, 26 July 2022 diff hist +69 Hoffman2:Software Tools:brms No edit summary
- 23:2423:24, 26 July 2022 diff hist +4 Hoffman2:Software Tools:brms No edit summary
- 23:2323:23, 26 July 2022 diff hist +324 N Hoffman2:Software Tools:brms Created page with "Use R library brms in Hoffman module load R/4.1.2 module load gcc/5.3.0 export R_LIBS='/u/project/CCN/apps/R_libs/rh7/4.1.2 Start R R >require(rstan) >require(brms) To..."
- 23:2023:20, 26 July 2022 diff hist +365 Hoffman2:Software Tools No edit summary
7 July 2022
5 July 2022
- 22:5922:59, 5 July 2022 diff hist +3 Hoffman2 maintenance and Issues →Update date: 2022.07.05
- 22:5822:58, 5 July 2022 diff hist +10 Hoffman2 maintenance and Issues →Update date: 2022.07.05
- 22:5822:58, 5 July 2022 diff hist +336 Hoffman2 maintenance and Issues No edit summary
17 June 2022
- 22:4322:43, 17 June 2022 diff hist −2 Hoffman2:Software Tools:Rstan No edit summary current
- 22:4322:43, 17 June 2022 diff hist +8 Hoffman2:Software Tools:Rstan No edit summary
- 22:4322:43, 17 June 2022 diff hist +252 N Hoffman2:Software Tools:Rstan Created page with " To use Rstan, we need to load R version/4.1.2 module load R/4.1.2 module load gcc/5.3.0 export R_LIBS='/u/project/CCN/apps/R_libs/rh7/4.1.2' Enter R prompt and test Rstan R..."
- 22:3922:39, 17 June 2022 diff hist +1 Hoffman2:Software Tools →RStan
- 22:3922:39, 17 June 2022 diff hist +40 Hoffman2:Software Tools →RStan
- 22:3722:37, 17 June 2022 diff hist +251 Hoffman2:Software Tools No edit summary
8 June 2022
- 21:0021:00, 8 June 2022 diff hist −1 Hoffman2:Software Tools:ica-aroma py27 No edit summary current
28 May 2022
- 21:5021:50, 28 May 2022 diff hist +30 Hoffman2:JupyterNotebook →Connecting to Hoffman2 current
- 21:4721:47, 28 May 2022 diff hist +111 Hoffman2:JupyterNotebook →Connecting to Hoffman2
- 21:4421:44, 28 May 2022 diff hist +5 Hoffman2:JupyterNotebook →Connecting to Hoffman2
- 21:4421:44, 28 May 2022 diff hist +16 Hoffman2:JupyterNotebook →Connecting to Hoffman2
17 May 2022
- 19:1819:18, 17 May 2022 diff hist −3 Hoffman2:Software Tools:FMRIprep No edit summary
- 19:1819:18, 17 May 2022 diff hist +8 Hoffman2:Software Tools:FMRIprep No edit summary
- 19:1719:17, 17 May 2022 diff hist +49 Hoffman2:Software Tools:FMRIprep No edit summary
- 19:1519:15, 17 May 2022 diff hist +76 Hoffman2:Software Tools:FMRIprep No edit summary
- 19:1419:14, 17 May 2022 diff hist +123 Hoffman2:Software Tools:FMRIprep No edit summary
- 19:1019:10, 17 May 2022 diff hist +8 Hoffman2:Software Tools:FMRIprep No edit summary
21 April 2022
- 17:4717:47, 21 April 2022 diff hist −10 BIDs configuration file No edit summary current
13 April 2022
- 19:0019:00, 13 April 2022 diff hist −127 Hoffman2:Scripts:setup subject 3 →Setup Environment current
- 18:5918:59, 13 April 2022 diff hist +229 Hoffman2:Scripts:setup subject 3 No edit summary
17 March 2022
- 23:2023:20, 17 March 2022 diff hist −1 Hoffman2:Software Tools:ica-aroma py27 No edit summary
- 23:1923:19, 17 March 2022 diff hist +70 Hoffman2:Software Tools:ica-aroma py27 No edit summary
10 March 2022
- 22:5122:51, 10 March 2022 diff hist 0 Hoffman2:Software Tools:ica-aroma py27 No edit summary
25 February 2022
- 20:1420:14, 25 February 2022 diff hist +77 Hoffman2:Software Tools: FMRIprep No edit summary current
- 20:0420:04, 25 February 2022 diff hist 0 Hoffman2:Software Tools: FMRIprep No edit summary
16 February 2022
- 04:4404:44, 16 February 2022 diff hist −143 CCN Workshops →Hoffman Workshops
- 04:4304:43, 16 February 2022 diff hist +287 CCN Workshops →Past Workshops
9 February 2022
- 23:5723:57, 9 February 2022 diff hist +109 Hoffman2:Python →CCN existing Conda Environments
- 23:5523:55, 9 February 2022 diff hist −16 Hoffman2:Python →Use Conda for Python virtual environment
- 23:5523:55, 9 February 2022 diff hist +27 Hoffman2:Python →Use Conda for Python virtual environment
- 23:5423:54, 9 February 2022 diff hist +144 Hoffman2:Python →Use Python in Hoffman2
- 23:5223:52, 9 February 2022 diff hist +238 Hoffman2:Python →Use Conda for Python virtual environment
- 23:5023:50, 9 February 2022 diff hist +367 Hoffman2:Python →Use Conda for Python virtual environment
- 23:4323:43, 9 February 2022 diff hist +333 Hoffman2:Python →Use Conda for Python virtual environment
- 23:3623:36, 9 February 2022 diff hist +50 Hoffman2:Python →Use Conda for Python virtual environment
- 23:3523:35, 9 February 2022 diff hist +237 Hoffman2:Python →Use Conda for Python virtual environment
- 23:3223:32, 9 February 2022 diff hist +111 Hoffman2:Python →Use Conda for Python virtual environment
11 January 2022
10 January 2022
- 23:2123:21, 10 January 2022 diff hist +187 Hoffman2:Python →Install Python libraires
- 23:1923:19, 10 January 2022 diff hist +437 Hoffman2:Python →Use Python in Hoffman2
- 23:1523:15, 10 January 2022 diff hist +33 Hoffman2:Python No edit summary
4 January 2022
- 20:1220:12, 4 January 2022 diff hist +19 Hoffman2:Software Tools →FSL
- 20:1120:11, 4 January 2022 diff hist −86 Hoffman2:Software Tools →FreeSurfer
- 20:0920:09, 4 January 2022 diff hist +106 Hoffman2:Software Tools →FreeSurfer