Hoffman2:Submit job: Difference between revisions

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export NO_FSL_JOBS=true
export NO_FSL_JOBS=true


# Now do something with fsl, feat, etc.
# Your script content goes here...
sleep 600</nowiki>

Revision as of 02:48, 29 November 2017

Back to all things Hoffman2

<nowiki>#!/bin/bash
  1. $ -cwd
  2. error = Merged with joblog
  3. $ -o joblog.$JOB_ID
  4. $ -j y
  5. $ -pe shared 2
  6. $ -l h_rt=8:00:00,h_data=4G
  7. Email address to notify
  8. $ -M $USER@mail
  9. Notify when
  10. $ -m bea
  1. load the job environment:

. /u/local/Modules/default/init/modules.sh module use /u/project/CCN/apps/modulefiles module load fsl

  1. This is optional
  2. More info here: https://www.ccn.ucla.edu/wiki/index.php/Hoffman2:FSL

export NO_FSL_JOBS=true

  1. Your script content goes here...