Hoffman2:Scripts:clean up.sh: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| (3 intermediate revisions by the same user not shown) | |||
| Line 13: | Line 13: | ||
<nowiki>*</nowiki> If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g. | <nowiki>*</nowiki> If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g. | ||
clean_up.sh - | clean_up.sh -f --dryrun /PATH/TO/FOLDER | ||
| Line 35: | Line 35: | ||
clean_up.sh -c /PATH/TO/FOLDER | clean_up.sh -c /PATH/TO/FOLDER | ||
Log File:<br> | Log File:<br> | ||
A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss" | A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"<br> | ||
<nowiki>*</nowiki> What if I want to recover some of the deleted files? | <nowiki>*</nowiki> What if I want to recover some of the deleted files? | ||
This script will | This script will move selected files to your $SCRATCH folder. In case you want to recover files being removed by this script, you can look for them under your $SCRATCH/YYYYMMDD_mmssms/ folder. | ||
Latest revision as of 22:24, 10 June 2025
This script is used to clean up the following files.
1. feat folders (+.feat) 2. FSL stdout and stderr files (such as *.e28678.8, *.o4436) 3. files end with .con .grp .Icon .mat 4. tsplot 5. core.[0-9]
Load the module first
module load ccnscripts
* If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g.
clean_up.sh -f --dryrun /PATH/TO/FOLDER
For clean up feat folders,
clean_up.sh -f /PATH/TO/FOLDER
For .o and .e files
clean_up.sh -o /PATH/TO/FOLDER
For .con .grp .Icon .mat
clean_up.sh -g /PATH/TO/FOLDER
For tsplot
clean_up.sh -t /PATH/TO/FOLDER
For core.[0-9]
clean_up.sh -c /PATH/TO/FOLDER
Log File:
A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"
* What if I want to recover some of the deleted files?
This script will move selected files to your $SCRATCH folder. In case you want to recover files being removed by this script, you can look for them under your $SCRATCH/YYYYMMDD_mmssms/ folder.