Incidental Finding Report Tool - Revision history

Melodie at 18:22, 28 January 2026

2026-01-28T18:22:31Z

← Older revision		Revision as of 18:22, 28 January 2026
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	- You may also create the movie using your own program. Just be sure it can be paused, replayed, and so on (e.g., a mp4 file). Animation files (e.g., gifs) will not allow the radiologist to carefully inspect the area of concern and are therefore of less informational value.		- You may also create the movie using your own program. Just be sure it can be paused, replayed, and so on (e.g., a mp4 file). Animation files (e.g., gifs) will not allow the radiologist to carefully inspect the area of concern and are therefore of less informational value.

	* Name your folder contains all the files with your lab name and subject ID.		* Name your folder that contains all the files with your lab name and subject ID.

Melodie: /* Incidental Finding Report Tool */

2026-01-28T18:21:38Z

Incidental Finding Report Tool

← Older revision		Revision as of 18:21, 28 January 2026
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	* The images should include '''T1''' and '''T2''', and are saved in png or jpeg/jpg formats.		* The images should include '''T1''' and '''T2''', and are saved in png or jpeg/jpg formats.

	* (Optional) You can create a movie from MRI images ~~using~~ CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]		* (Optional) You can create a "movie" from MRI images to give the radiologist with a fuller, 3D view. This is not required, but often useful in providing more detailed information for the review.
			- CCN offers a script that will create this movie from a nii.gz folder of structurals: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]
			- You may also create the movie using your own program. Just be sure it can be paused, replayed, and so on (e.g., a mp4 file). Animation files (e.g., gifs) will not allow the radiologist to carefully inspect the area of concern and are therefore of less informational value.

	* Name your folder contains all the files with your lab name and subject ID.		* Name your folder contains all the files with your lab name and subject ID.
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	* The compressed file should end with ".zip"		* The compressed file should end with ".zip"
			* If you do not zip your folder, the automated script that checks daily for new submissions will not detect it.

	3. Upload the zip file to the Box folder, “CCN_report/YOURGROUP”, which should be shared with your lab.		3. Upload the zip file to the Box folder, “CCN_report/YOURGROUP”, which should be shared with your lab.

	* <span style="color:#ff0000">'''Before you upload the files, please make sure the images and videos are in good quality so the radiologist can make the correct decision based on it.'''</span>		* <span style="color:#ff0000">'''Before you upload the files, please make sure the images and videos are in good quality so the radiologist can make the correct decision based on them.'''</span> No phone pictures of computer screens.

	If your lab does not have a Box group folder shared by us, please contact the following so we can set one up for you.		If your lab does not have a Box group folder shared by us, please contact the following so we can set one up for you.

Melodie: /* Incidental Finding Report Tool */

2025-02-28T22:52:51Z

Incidental Finding Report Tool

← Older revision		Revision as of 22:52, 28 February 2025
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	== Incidental Finding Report Tool ==		== Incidental Finding Report Tool ==
			<b> IMPORTANT REMINDER: You may only submit images for incidental finding review if you have this explicitly described in your approved IRB protocol and in your consent form. </b>

	[[File:Incidental finding report flow.png\|700px]]		[[File:Incidental finding report flow.png\|700px]]

Hwang at 19:01, 15 November 2024

2024-11-15T19:01:47Z

← Older revision		Revision as of 19:01, 15 November 2024
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	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.

	* The images should include '''T1''' and '''T2''', and are in png or jpeg/jpg formats.		* The images should include '''T1''' and '''T2''', and are saved in png or jpeg/jpg formats.

	* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]		* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]

Hwang at 19:00, 15 November 2024

2024-11-15T19:00:54Z

← Older revision		Revision as of 19:00, 15 November 2024
Line 5:		Line 5:
	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.

	* The images should include T1 and T2, and are in png or jpeg/jpg formats.		* The images should include '''T1''' and '''T2''', and are in png or jpeg/jpg formats.

	* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]		* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]

Hwang at 19:00, 15 November 2024

2024-11-15T19:00:14Z

← Older revision		Revision as of 19:00, 15 November 2024
Line 5:		Line 5:
	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.

	* The images should be png or jpeg/jpg ~~files~~.		* The images should include T1 and T2, and are in png or jpeg/jpg formats.

	* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]		* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]

Hwang at 15:06, 15 November 2024

2024-11-15T15:06:13Z

← Older revision		Revision as of 15:06, 15 November 2024
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	[[File:Incidental finding report flow.png\|700px]]		[[File:Incidental finding report flow.png\|700px]]

	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''~~Make sure to~~ circle the area where you consider an anomaly'''</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Please circle the area where you consider an anomaly'''</span>.

	* The images should be png or jpeg/jpg files.		* The images should be png or jpeg/jpg files.

Hwang at 19:37, 14 November 2024

2024-11-14T19:37:16Z

← Older revision		Revision as of 19:37, 14 November 2024
Line 3:		Line 3:
	[[File:Incidental finding report flow.png\|700px]]		[[File:Incidental finding report flow.png\|700px]]

	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Make sure to circle the area where you consider ~~there is~~ an anomaly'''</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Make sure to circle the area where you consider an anomaly'''</span>.

	* The images should be png or jpeg/jpg files.		* The images should be png or jpeg/jpg files.

Hwang at 19:36, 14 November 2024

2024-11-14T19:36:05Z

← Older revision		Revision as of 19:36, 14 November 2024
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	* The images should be png or jpeg/jpg files.		* The images should be png or jpeg/jpg files.

	* You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]		* (Optional) You can create a movie from MRI images using CCN script: [[Hoffman2:Scripts:gen_movie.py\|gen_movie.py]]

	* Name your folder contains all the files with your lab name and subject ID.		* Name your folder contains all the files with your lab name and subject ID.

Hwang at 19:19, 14 November 2024

2024-11-14T19:19:53Z

← Older revision		Revision as of 19:19, 14 November 2024
Line 3:		Line 3:
	[[File:Incidental finding report flow.png\|700px]]		[[File:Incidental finding report flow.png\|700px]]

	1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">Make sure to circle the area where you consider there's an anomaly</span>.		1. Create a folder and put in all your images and movie files you want to send to the radiologist. <span style="color:#ff0000">'''Make sure to circle the area where you consider there is an anomaly'''</span>.

	* The images should be png or jpeg/jpg files.		* The images should be png or jpeg/jpg files.
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	3. Upload the zip file to the Box folder, “CCN_report/YOURGROUP”, which should be shared with your lab.		3. Upload the zip file to the Box folder, “CCN_report/YOURGROUP”, which should be shared with your lab.

	* <span style="color:#ff0000">Before you upload the files, please make sure the images and videos are in good quality so the radiologist can make the correct decision based on it.</span>		* <span style="color:#ff0000">'''Before you upload the files, please make sure the images and videos are in good quality so the radiologist can make the correct decision based on it.'''</span>

	If your lab does not have a Box group folder shared by us, please contact the following so we can set one up for you.		If your lab does not have a Box group folder shared by us, please contact the following so we can set one up for you.