Hoffman2:Scripts:dcmheader.py - Revision history

Hwang: /* Setup Environment */

2021-10-07T17:39:07Z

Setup Environment

← Older revision		Revision as of 17:39, 7 October 2021
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	To use this script, you need to load python module first and export the library location:		To use this script, you need to load python module first and export the library location:

	module load python~~/3.6.1_shared~~		module load python
	module load ccnscripts		module load ccnscripts
	export PYTHONPATH=/u/project/CCN/apps/python_libs/3.6/site-packages/		export PYTHONPATH=/u/project/CCN/apps/python_libs/3.6/site-packages/

2020-04-27T23:28:40Z

Options

← Older revision		Revision as of 23:28, 27 April 2020
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	Update multiple items (separate multiple items by space)		Update multiple items (separate multiple items by space)
	~~(in~~ this example, change both of the Patient's Name and Patient ID values to 12345_1):
			In this example, change both of the Patient's Name and Patient ID values to 12345_1:
	dcmheader.py -f /path/to/my/dicom/subject/file -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"		dcmheader.py -f /path/to/my/dicom/subject/file -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"

2020-04-27T23:27:19Z

Options

← Older revision		Revision as of 23:27, 27 April 2020
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	dcmheader.py -f /path/to/my/dicom/subject/ -c "(0010, 0010)"		dcmheader.py -f /path/to/my/dicom/subject/ -c "(0010, 0010)"

	View multiple header items in a single file:		View multiple header items in a single file (separate multiple items by space):
	dcmheader.py -f /path/to/my/dicom/subject/file -c "(0010, 0010) (0010, 0020)"		dcmheader.py -f /path/to/my/dicom/subject/file -c "(0010, 0010) (0010, 0020)"

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	dcmheader.py -f /path/to/my/dicom/subject/ -u "(0010, 0010)=12345_1"		dcmheader.py -f /path/to/my/dicom/subject/ -u "(0010, 0010)=12345_1"

	Update multiple items (separate ~~the~~ multiple items by space)		Update multiple items (separate multiple items by space)
	(in this example, change both of the Patient's Name and Patient ID values to 12345_1):		(in this example, change both of the Patient's Name and Patient ID values to 12345_1):
	dcmheader.py -f /path/to/my/dicom/subject/file -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"		dcmheader.py -f /path/to/my/dicom/subject/file -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"

2020-04-27T23:26:11Z

Options

2020-04-27T23:25:38Z

Options

← Older revision		Revision as of 23:25, 27 April 2020
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	dcmheader.py -f /path/to/my/dicom/file -p (or --print )		dcmheader.py -f /path/to/my/dicom/file -p (or --print )
	You'll see similar output as following from option "--print"		You'll see similar output as the following from option "--print"

	(0010, 0010) Patient's Name PN: '12345'		(0010, 0010) Patient's Name PN: '12345'

2020-04-27T23:25:12Z

Options

← Older revision		Revision as of 23:25, 27 April 2020
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	--print (or -p)		--print (or -p)
	Show the full header of a dcm file.This option does not require any argument. However it does not work towards a folder.		Show the full header of a dcm file.This option does not require any argument. However it does not work towards a folder.

	Example:		Example:

2020-04-27T23:24:56Z

Options

← Older revision		Revision as of 23:24, 27 April 2020
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	--print (or -p)		--print (or -p)
	Show the full header of a dcm file.This option does not require any argument. However it does not work towards a folder.		Show the full header of a dcm file.This option does not require any argument. However it does not work towards a folder.
			Example:

	dcmheader.py -f /path/to/my/dicom/file -p (or --print )		dcmheader.py -f /path/to/my/dicom/file -p (or --print )
	You'll see similar output as following from option "--print"		You'll see similar output as following from option "--print"

2020-04-27T23:24:24Z

Options

← Older revision		Revision as of 23:24, 27 April 2020
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	'''Print out the whole header information'''		'''Print out the whole header information'''
	--print (or -p)		--print (or -p)
	Show the full header of a dcm file.		Show the full header of a dcm file.This option does not require any argument. However it does not work towards a folder.

	This option does not require any argument. However it does not work towards a folder.
	dcmheader.py -f /path/to/my/dicom/file -p (or --print )		dcmheader.py -f /path/to/my/dicom/file -p (or --print )
	You'll see similar output as following from option "--print"		You'll see similar output as following from option "--print"

2020-04-27T23:23:57Z

Options

← Older revision		Revision as of 23:23, 27 April 2020
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	--file (or -f)		--file (or -f)

	'''Print whole header information'''		'''Print out the whole header information'''
	--print (or -p)		--print (or -p)
	Show the full header of a dcm file.		Show the full header of a dcm file.

2020-04-27T23:23:32Z

← Older revision		Revision as of 23:23, 27 April 2020
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	==Options==		==Options==
	~~===~~Specify target file or folder to be viewed or updated~~===~~		'''Specify target file or folder to be viewed or updated'''
	(This option cannot be skipped)		(This option cannot be skipped)
	--file (or -f)		--file (or -f)

	~~===~~Print whole header information~~===~~		'''Print whole header information'''
	--print (or -p)		--print (or -p)
	Show the full header of a dcm file.		Show the full header of a dcm file.
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	dcmheader.py -f /path/to/my/dicom/subject/ -c "(0010, 0010) (0010, 0020)"		dcmheader.py -f /path/to/my/dicom/subject/ -c "(0010, 0010) (0010, 0020)"

	==Update specific header items==		'''Update specific header items'''
	--update (or -u)		--update (or -u)
	Updating specific header items by specifying the tag and new value in format as "tag=new_value"		Updating specific header items by specifying the tag and new value in format as "tag=new_value"
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	dcmheader.py -f /path/to/my/dicom/subject/ -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"		dcmheader.py -f /path/to/my/dicom/subject/ -u "(0010, 0010)=12345_1 (0010, 0020)=12345_1"

	==Show more logs of update process==		'''Show more logs of update process'''
	--verbose (or -v)		--verbose (or -v)