Hoffman2:Scripts:clean up.sh - Revision history

Hwang at 22:24, 10 June 2025

2025-06-10T22:24:32Z

← Older revision		Revision as of 22:24, 10 June 2025
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	<nowiki>*</nowiki> If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g.		<nowiki>*</nowiki> If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g.

	clean_up.sh -c --dryrun /PATH/TO/FOLDER		clean_up.sh -f --dryrun /PATH/TO/FOLDER

Hwang at 22:22, 10 June 2025

2025-06-10T22:22:14Z

← Older revision		Revision as of 22:22, 10 June 2025
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	Log File:<br>		Log File:<br>
	A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"		A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"<br>

	<nowiki>*</nowiki> What if I want to recover some of the deleted files?		<nowiki>*</nowiki> What if I want to recover some of the deleted files?

	This script will move selected files to your $SCRATCH folder. In case you want to recover files being removed by this script, you can look for them under your $SCRATCH/YYYYMMDD_mmssms/ folder.		This script will move selected files to your $SCRATCH folder. In case you want to recover files being removed by this script, you can look for them under your $SCRATCH/YYYYMMDD_mmssms/ folder.

Hwang at 22:21, 10 June 2025

2025-06-10T22:21:39Z

← Older revision		Revision as of 22:21, 10 June 2025
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	clean_up.sh -c /PATH/TO/FOLDER		clean_up.sh -c /PATH/TO/FOLDER

Hwang at 22:21, 10 June 2025

2025-06-10T22:21:20Z

← Older revision		Revision as of 22:21, 10 June 2025
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	<nowiki>*</nowiki> What if I want to recover some of the deleted files?		<nowiki>*</nowiki> What if I want to recover some of the deleted files?

	This script will ~~moved~~ selected files to $SCRATCH folder. In case you want to recover files being ~~cleaned up~~ by this script, you can look for them in your $SCRATCH/~~$DATE/TARGET~~/~~FOLDERS~~ folder		This script will move selected files to your $SCRATCH folder. In case you want to recover files being removed by this script, you can look for them under your $SCRATCH/YYYYMMDD_mmssms/ folder.

Hwang at 22:18, 10 June 2025

2025-06-10T22:18:09Z

← Older revision		Revision as of 22:18, 10 June 2025
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	Load the module first		Load the module first
	module load ccnscripts		module load ccnscripts

			<nowiki>*</nowiki> If you just want to see what files will be deleted without really deleting them, add --dryrun, e.g.

			clean_up.sh -c --dryrun /PATH/TO/FOLDER


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	clean_up.sh -c /PATH/TO/FOLDER		clean_up.sh -c /PATH/TO/FOLDER

	~~<nowiki>*</nowiki> If you want to see what files will be deleted without really deleting them, use --dryrun, e.g.~~

	~~clean_up.sh -c --dryrun /PATH/TO/FOLDER~~

Hwang at 22:17, 10 June 2025

2025-06-10T22:17:17Z

← Older revision		Revision as of 22:17, 10 June 2025
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	clean_up.sh -c /PATH/TO/FOLDER		clean_up.sh -c /PATH/TO/FOLDER

	* If you want to see what files will be deleted without really deleting them, use --dryrun, e.g.		<nowiki>*</nowiki> If you want to see what files will be deleted without really deleting them, use --dryrun, e.g.

	clean_up.sh -c --dryrun /PATH/TO/FOLDER		clean_up.sh -c --dryrun /PATH/TO/FOLDER


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	A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"		A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"

	* What if I want to recover some of the deleted files?		<nowiki>*</nowiki> What if I want to recover some of the deleted files?

	This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH/DATE/TARGET/FOLDERS folder		This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH/$DATE/TARGET/FOLDERS folder

Hwang at 22:15, 10 June 2025

2025-06-10T22:15:01Z

← Older revision		Revision as of 22:15, 10 June 2025
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	This script is used to clean up the following files.		This script is used to clean up the following files.

	~~1. tsplot~~
	2. feat folders (+.feat)		1. feat folders (+.feat)
	3. FSL stdout and stderr files (such as .e28678.8, .o4436)		2. FSL stdout and stderr files (such as .e28678.8, .o4436)
	4. files end with .con .grp .Icon .mat		3. files end with .con .grp .Icon .mat
			4. tsplot
			5. core.[0-9]

	Load the module first		Load the module first
	module load ccnscripts		module load ccnscripts


	For clean up feat folders,		For clean up feat folders,
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	clean_up.sh -o /PATH/TO/FOLDER		clean_up.sh -o /PATH/TO/FOLDER

			For .con .grp .Icon .mat

			clean_up.sh -g /PATH/TO/FOLDER

	For tsplot		For tsplot

	clean_up.sh -t /PATH/TO/FOLDER		clean_up.sh -t /PATH/TO/FOLDER

			For core.[0-9]

			clean_up.sh -c /PATH/TO/FOLDER

			* If you want to see what files will be deleted without really deleting them, use --dryrun, e.g.

			clean_up.sh -c --dryrun /PATH/TO/FOLDER


	Log File:<br>		Log File:<br>
	A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"		A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"

	This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH folder		* What if I want to recover some of the deleted files?

			This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH/DATE/TARGET/FOLDERS folder

Hwang at 22:36, 19 May 2025

2025-05-19T22:36:29Z

← Older revision		Revision as of 22:36, 19 May 2025
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	clean_up.sh -t /PATH/TO/FOLDER		clean_up.sh -t /PATH/TO/FOLDER

	Log File:		Log File:<br>
	A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"		A log file will be generated under the folder where you run it, named as "clean_up_log.YYYYMMDD_ss"

	This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH folder		This script will moved selected files to $SCRATCH folder. In case you want to recover files being cleaned up by this script, you can look for them in your $SCRATCH folder

Hwang at 22:35, 19 May 2025

2025-05-19T22:35:59Z

← Older revision		Revision as of 22:35, 19 May 2025
Line 9:		Line 9:
	module load ccnscripts		module load ccnscripts


	For clean up feat folders,		For clean up feat folders,

	clean_up.sh -f /PATH/TO/FOLDER		clean_up.sh -f /PATH/TO/FOLDER


	For .o and .e files		For .o and .e files

	clean_up.sh -o /PATH/TO/FOLDER		clean_up.sh -o /PATH/TO/FOLDER


	For tsplot		For tsplot

Hwang at 22:35, 19 May 2025

2025-05-19T22:35:33Z

← Older revision		Revision as of 22:35, 19 May 2025
Line 5:		Line 5:
	3. FSL stdout and stderr files (such as .e28678.8, .o4436)		3. FSL stdout and stderr files (such as .e28678.8, .o4436)
	4. files end with .con .grp .Icon .mat		4. files end with .con .grp .Icon .mat


	Load the module first		Load the module first