BIDs configuration file - Revision history

Hwang at 17:47, 21 April 2022

2022-04-21T17:47:05Z

← Older revision		Revision as of 17:47, 21 April 2022
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	====Example:====		====Example:====

	gre_fieldmap_5 sub-'''SUBJ'''~~_fmap_magnitude~~		gre_fieldmap_5 sub-'''SUBJ'''_magnitude
	gre_fieldmap_6 sub-'''SUBJ'''~~_fmap_phasediff~~		gre_fieldmap_6 sub-'''SUBJ'''_phasediff
	Task_Block_1_9 sub-'''SUBJ'''_task-rest_bold		Task_Block_1_9 sub-'''SUBJ'''_task-rest_bold
	MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w		MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w

2020-10-03T00:19:09Z

Example:

← Older revision		Revision as of 00:19, 3 October 2020
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	gre_fieldmap_5 sub-'''SUBJ'''_fmap_magnitude		gre_fieldmap_5 sub-'''SUBJ'''_fmap_magnitude
	gre_fieldmap_6 sub-'''SUBJ'''_fmap_phasediff		gre_fieldmap_6 sub-'''SUBJ'''_fmap_phasediff
	Task_Block_1_9 sub-'''SUBJ'''~~_task1~~		Task_Block_1_9 sub-'''SUBJ'''_task-rest_bold
	~~Task_Block_2_10 sub~~-~~'''SUBJ'''_task2~~
	MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w		MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w

2020-01-30T18:01:56Z

BIDs configuration file

← Older revision		Revision as of 18:01, 30 January 2020
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	...		...

	The ~~Original_File_Name~~ and the sub-SUBJ_Name are separated by a space.		The original_File_Name and the sub-SUBJ_Name are separated by a space.

	'''SUBJ''' will be converted automatically to the subject ID		'''SUBJ''' will be converted automatically to the subject ID

2020-01-30T18:01:25Z

BIDs configuration file

← Older revision		Revision as of 18:01, 30 January 2020
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	This file should have the following format for all files you want to be converted to BIDs style names.		This file should have the following format for all files you want to be converted to BIDs style names.

	~~Original_File_Name~~ sub-'''SUBJ'''_Name		original_File_Name sub-'''SUBJ'''_Name
	~~Original_File_Name~~ sub-'''SUBJ'''_Name		original_File_Name sub-'''SUBJ'''_Name
	~~Original_File_Name~~ sub-'''SUBJ'''_Name		original_File_Name sub-'''SUBJ'''_Name
	...		...

2020-01-30T18:00:38Z

Example:

← Older revision		Revision as of 18:00, 30 January 2020
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	====Example:====		====Example:====

	gre_fieldmap_5 sub-'''SUBJ'''~~_fmap_mag~~		gre_fieldmap_5 sub-'''SUBJ'''_fmap_magnitude
	gre_fieldmap_6 sub-'''SUBJ'''~~_fmap_phase~~		gre_fieldmap_6 sub-'''SUBJ'''_fmap_phasediff
	~~MPRAGE_15 sub-'''SUBJ'''_mprage~~
	Task_Block_1_9 sub-'''SUBJ'''_task1		Task_Block_1_9 sub-'''SUBJ'''_task1
	Task_Block_2_10 sub-'''SUBJ'''_task2		Task_Block_2_10 sub-'''SUBJ'''_task2

	MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w		MPRAGE_6.4_min__0.8X0.8X0.8mm_8 sub-'''SUBJ'''_T1w
	~~MPRAGE_6.4_min__0.8X0.8X0.8mm_7 sub-'''SUBJ'''_T1w_rec-uncorrected~~

2020-01-28T18:02:06Z

← Older revision		Revision as of 18:02, 28 January 2020
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	(For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )		(For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )

	The "Name" ~~part~~ in "sub-SUBJ_Name" should be replace by the string ~~you want to use~~ following the [https://bids.neuroimaging.io/ BIDs format] rules.		The "Name" in "sub-SUBJ_Name" should be replace by the string following the [https://bids.neuroimaging.io/ BIDs format] rules.

	====Example:====		====Example:====

2020-01-22T19:27:30Z

BIDs configuration file

← Older revision		Revision as of 19:27, 22 January 2020
Line 15:		Line 15:
	(For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )		(For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )

	The "Name" part in "sub-SUBJ_Name" should be replace by the ~~text~~ you want to use following the [https://bids.neuroimaging.io/ BIDs format] rules.		The "Name" part in "sub-SUBJ_Name" should be replace by the string you want to use following the [https://bids.neuroimaging.io/ BIDs format] rules.

	====Example:====		====Example:====

2020-01-22T19:26:28Z

← Older revision		Revision as of 19:26, 22 January 2020
Line 12:		Line 12:
	The Original_File_Name and the sub-SUBJ_Name are separated by a space.		The Original_File_Name and the sub-SUBJ_Name are separated by a space.

	'''SUBJ''' will be converted automatically to the subject ID ~~when you run the setup_subject_3 script.~~		'''SUBJ''' will be converted automatically to the subject ID
	(So "sub-SUBJ" will be "sub-1234" ~~in case the subject ID is "1234" as the result file name~~)		(For example, for subject ID "1234", "sub-SUBJ" will be changed to "sub-1234" )

	The "Name" part in "sub-SUBJ_Name" should be replace by the text you want to use following the [https://bids.neuroimaging.io/ BIDs format] rules.		The "Name" part in "sub-SUBJ_Name" should be replace by the text you want to use following the [https://bids.neuroimaging.io/ BIDs format] rules.

2020-01-22T19:23:28Z

← Older revision		Revision as of 19:23, 22 January 2020
Line 12:		Line 12:
	The Original_File_Name and the sub-SUBJ_Name are separated by a space.		The Original_File_Name and the sub-SUBJ_Name are separated by a space.

	'''SUBJ''' will be converted automatically to the subject ID ~~which specified~~ when you run the setup_subject_3 script.		'''SUBJ''' will be converted automatically to the subject ID when you run the setup_subject_3 script.
	(So "sub-SUBJ" will be "sub-1234" in case the subject ID is "1234" as the result file name)		(So "sub-SUBJ" will be "sub-1234" in case the subject ID is "1234" as the result file name)

2019-10-28T18:32:15Z

BIDs configuration file

← Older revision		Revision as of 18:32, 28 October 2019
Line 15:		Line 15:
	(So "sub-SUBJ" will be "sub-1234" in case the subject ID is "1234" as the result file name)		(So "sub-SUBJ" will be "sub-1234" in case the subject ID is "1234" as the result file name)

	The "Name" part in "sub-SUBJ_Name" should be replace by the text you want to use following the [https://bids.neuroimaging.io/ \| BIDs format] rules.		The "Name" part in "sub-SUBJ_Name" should be replace by the text you want to use following the [https://bids.neuroimaging.io/ BIDs format] rules.

	====Example:====		====Example:====